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USC-OGP 2-DE database
Two-dimensional polyacrylamide gel electrophoresis database
USC-OGP 2-DE database
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Searching in 'USC-OGP 2-DE database' for entry
matching:
P00558
USC-OGP 2-DE database
:
P00558
P00558
General information about the entry
View entry in simple text format
Entry name
PGK1_HUMAN
Primary accession number
P00558
integrated into USC-OGP 2-DE database on
January 17, 2017 (release 1)
2D Annotations were last modified on
January 17, 2017 (version 1)
General Annotations were last modified on
April 5, 2017 (version 2)
Name and origin of the protein
Description
RecName: Full=Phosphoglycerate kinase 1; EC=2.7.2.3; AltName: Full=Cell migration-inducing gene 10 protein; AltName: Full=Primer recognition protein 2; Short=PRP 2;.
Gene name
Name=PGK1
Synonyms=PGKA
ORFNames=MIG10, OK/SW-cl.110
Annotated species
Homo sapiens (Human) [TaxID:
9606
]
Taxonomy
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo.
References
[1]
2D GEL CHARACTERIZATION
Author 1., Author 2.
Submitted (Mar-2011) to Current
2D PAGE maps for identified proteins
How to interpret a protein
PLATELET_6-11
{PLATELET 6-11}
Homo sapiens (Human)
map experimental info
PLATELET_6-11
MAP LOCATIONS:
SPOT OGP-0931
:
pI=7.60; Mw=44126
SPOT OGP-0936
:
pI=7.82; Mw=43304
Cross-references
UniProtKB/Swiss-Prot
P00558; PGK1_HUMAN.
2D PAGE maps for identified proteins
How to interpret a protein map
You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw.
Warning 1
: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly.
Warning 2
: the 2D PAGE map is built on demand. This may take some few seconds to be computed.
External data extracted from
UniProtKB/Swiss-Prot
Extracted from
UniProtKB/Swiss-Prot
, release:
0.0
Entry name
PGK1_HUMAN
Primary accession number
P00558
Secondary accession number(s)
A8K4W6 B7Z7A9 Q5J7W1 Q6IBT6 Q8NI87
Sequence was last modified on
January 23, 2007 (version 3)
Annotations were last modified on
March 15, 2017 (version 196)
Name and origin of the protein
Description
RecName: Full=Phosphoglycerate kinase 1; EC=2.7.2.3; AltName: Full=Cell migration-inducing gene 10 protein; AltName: Full=Primer recognition protein 2; Short=PRP 2;
Gene name
Name=PGK1
Synonyms=PGKA
ORFNames=MIG10, OK/SW-cl.110
Encoded on
Name=PGK1; Synonyms=PGKA; ORFNames=MIG10, OK/SW-cl.110
Keywords
3D-structure
;
Acetylation
;
Alternative splicing
;
ATP-binding
;
Complete proteome
;
Cytoplasm
;
Direct protein sequencing
;
Disease mutation
;
Glycolysis
;
Hereditary hemolytic anemia
;
Kinase
;
Nucleotide-binding
;
Phosphoprotein
;
Polymorphism
;
Reference proteome
;
Transferase
.
Copyright
Copyrighted by the UniProt Consortium, see
http://www.uniprot.org/help/license
. Distributed under the Creative Commons Attribution-NoDerivs License
Cross-references
EMBL
V00572; CAA23835.1
; -; mRNA
EMBL
L00160; AAA60078.1
; -; mRNA
EMBL
M11968; AAA60079.1
; -; Genomic_DNA
EMBL
M11958; AAA60079.1
; JOINED; Genomic_DNA
EMBL
M11959; AAA60079.1
; JOINED; Genomic_DNA
EMBL
M11960; AAA60079.1
; JOINED; Genomic_DNA
EMBL
M11961; AAA60079.1
; JOINED; Genomic_DNA
EMBL
M11962; AAA60079.1
; JOINED; Genomic_DNA
EMBL
M11963; AAA60079.1
; JOINED; Genomic_DNA
EMBL
M11964; AAA60079.1
; JOINED; Genomic_DNA
EMBL
M11965; AAA60079.1
; JOINED; Genomic_DNA
EMBL
M11966; AAA60079.1
; JOINED; Genomic_DNA
EMBL
M11967; AAA60079.1
; JOINED; Genomic_DNA
EMBL
AY423725; AAS00488.1
; -; mRNA
EMBL
AB062432; BAB93495.1
; -; mRNA
EMBL
AK291081; BAF83770.1
; -; mRNA
EMBL
AK301740; BAH13545.1
; -; mRNA
EMBL
AK312280; BAG35209.1
; -; mRNA
EMBL
CR456716; CAG32997.1
; -; mRNA
EMBL
AL049589; CAI42951.1
; -; Genomic_DNA
EMBL
CH471104; EAW98604.1
; -; Genomic_DNA
EMBL
BC023234; AAH23234.1
; -; mRNA
EMBL
BC103752; AAI03753.1
; -; mRNA
EMBL
BC104837; AAI04838.1
; -; mRNA
EMBL
BC113568; AAI13569.1
; -; mRNA
EMBL
M34017; AAA60103.1
; -; Genomic_DNA
CCDS
CCDS14438.1; -. [P00558-1]
; .
PIR
I59050; KIHUG
; .
RefSeq
NP_000282.1; NM_000291.3. [P00558-1]
; .
UniGene
Hs.78771; -
; .
PDB
2WZB; X-ray
; 1.47 A; A=2-417
PDB
2WZC; X-ray
; 1.50 A; A=2-417
PDB
2WZD; X-ray
; 1.56 A; A=1-417
PDB
2X13; X-ray
; 1.74 A; A=2-417
PDB
2X14; X-ray
; 1.90 A; A=2-417
PDB
2X15; X-ray
; 2.10 A; A=2-417
PDB
2XE6; X-ray
; 1.74 A; A=1-417
PDB
2XE7; X-ray
; 2.20 A; A=1-417
PDB
2XE8; X-ray
; 1.79 A; A=1-417
PDB
2Y3I; X-ray
; 2.90 A; A/D=1-416
PDB
2YBE; X-ray
; 2.00 A; A=1-417
PDB
2ZGV; X-ray
; 2.00 A; A=1-417
PDB
3C39; X-ray
; 1.85 A; A/B=1-417
PDB
3C3A; X-ray
; 2.30 A; A/B=1-417
PDB
3C3B; X-ray
; 1.80 A; A/B=1-417
PDB
3C3C; X-ray
; 2.40 A; A/B=1-417
PDB
3ZOZ; X-ray
; 1.95 A; A=1-417
PDB
4AXX; X-ray
; 1.74 A; A=1-417
PDB
4O33; X-ray
; 2.10 A; A=1-417
PDBsum
2WZB; -
; .
PDBsum
2WZC; -
; .
PDBsum
2WZD; -
; .
PDBsum
2X13; -
; .
PDBsum
2X14; -
; .
PDBsum
2X15; -
; .
PDBsum
2XE6; -
; .
PDBsum
2XE7; -
; .
PDBsum
2XE8; -
; .
PDBsum
2Y3I; -
; .
PDBsum
2YBE; -
; .
PDBsum
2ZGV; -
; .
PDBsum
3C39; -
; .
PDBsum
3C3A; -
; .
PDBsum
3C3B; -
; .
PDBsum
3C3C; -
; .
PDBsum
3ZOZ; -
; .
PDBsum
4AXX; -
; .
PDBsum
4O33; -
; .
ProteinModelPortal
P00558; -
; .
SMR
P00558; -
; .
BioGrid
111251; 94
; .
DIP
DIP-33679N; -
; .
IntAct
P00558; 38
; .
MINT
MINT-1131047; -
; .
STRING
9606.ENSP00000362413; -
; .
ChEMBL
CHEMBL2096677; -
; .
DrugBank
DB04510; 3-Phosphoglyceric Acid
; .
DrugBank
DB00709; Lamivudine
; .
iPTMnet
P00558; -
; .
PhosphoSitePlus
P00558; -
; .
SwissPalm
P00558; -
; .
BioMuta
PGK1; -
; .
DMDM
52788229; -
; .
DOSAC-COBS-2DPAGE
P00558; -
; .
OGP
P00558; -
; .
REPRODUCTION-2DPAGE
IPI00169383; -
; .
REPRODUCTION-2DPAGE
P00558; -
; .
UCD-2DPAGE
P00558; -
; .
EPD
P00558; -
; .
PaxDb
P00558; -
; .
PeptideAtlas
P00558; -
; .
PRIDE
P00558; -
; .
TopDownProteomics
P00558-1; -. [P00558-1]
; .
DNASU
5230; -
; .
Ensembl
ENST00000373316; ENSP00000362413
; ENSG00000102144. [P00558-1]; .
GeneID
5230; -
; .
KEGG
hsa:5230; -
; .
CTD
5230; -
; .
DisGeNET
5230; -
; .
GeneCards
PGK1; -
; .
HGNC
HGNC:8896; PGK1
; .
HPA
CAB010065; -
; .
HPA
HPA045385; -
; .
MalaCards
PGK1; -
; .
MIM
300653; phenotype
; .
MIM
311800; gene
; .
neXtProt
NX_P00558; -
; .
OpenTargets
ENSG00000102144; -
; .
Orphanet
713; Glycogen storage disease due to phosphoglycerate kinase 1 deficiency
; .
PharmGKB
PA33234; -
; .
eggNOG
KOG1367; Eukaryota
; .
eggNOG
COG0126; LUCA
; .
GeneTree
ENSGT00390000008820; -
; .
HOGENOM
HOG000227107; -
; .
HOVERGEN
HBG008177; -
; .
InParanoid
P00558; -
; .
KO
K00927; -
; .
OMA
IKHCLDH; -
; .
OrthoDB
EOG091G08S6; -
; .
PhylomeDB
P00558; -
; .
TreeFam
TF300489; -
; .
BioCyc
MetaCyc:HS02359-MONOMER; -
; .
Reactome
R-HSA-70171; Glycolysis
; .
Reactome
R-HSA-70263; Gluconeogenesis
; .
SABIO-RK
P00558; -
; .
UniPathway
UPA00109; UER00185
; .
ChiTaRS
PGK1; human
; .
EvolutionaryTrace
P00558; -
; .
GeneWiki
PGK1; -
; .
GenomeRNAi
5230; -
; .
PRO
PR:P00558; -
; .
Proteomes
UP000005640; Chromosome X
; .
Bgee
ENSG00000102144; -
; .
CleanEx
HS_PGK1; -
; .
ExpressionAtlas
P00558; baseline and differential
; .
Genevisible
P00558; HS
; .
GO
GO:0005829; C:cytosol
; TAS:Reactome; .
GO
GO:0070062; C:extracellular exosome
; IDA:UniProtKB; .
GO
GO:0016020; C:membrane
; IDA:UniProtKB; .
GO
GO:0045121; C:membrane raft
; IDA:UniProtKB; .
GO
GO:0005524; F:ATP binding
; ISS:UniProtKB; .
GO
GO:0004618; F:phosphoglycerate kinase activity
; ISS:UniProtKB; .
GO
GO:0061621; P:canonical glycolysis
; TAS:Reactome; .
GO
GO:0030855; P:epithelial cell differentiation
; IEP:UniProtKB; .
GO
GO:0006094; P:gluconeogenesis
; TAS:Reactome; .
GO
GO:0016310; P:phosphorylation
; ISS:UniProtKB; .
CDD
cd00318; Phosphoglycerate_kinase
; 1; .
Gene3D
3.40.50.1260; -
; 1; .
Gene3D
3.40.50.1270; -
; 1; .
HAMAP
MF_00145; Phosphoglyc_kinase
; 1; .
InterPro
IPR001576; Phosphoglycerate_kinase
; .
InterPro
IPR015901; Phosphoglycerate_kinase_C
; .
InterPro
IPR015911; Phosphoglycerate_kinase_CS
; .
InterPro
IPR015824; Phosphoglycerate_kinase_N
; .
PANTHER
PTHR11406; PTHR11406
; 1; .
Pfam
PF00162; PGK
; 1; .
PIRSF
PIRSF000724; Pgk
; 1; .
PRINTS
PR00477; PHGLYCKINASE
; .
SUPFAM
SSF53748; SSF53748
; 1; .
PROSITE
PS00111; PGLYCERATE_KINASE
; 1; .
Gateways to other related servers
The World-2DPAGE Constellation
- Entry point to the world-wide 2-DPAGE resources.
World-2DPAGE Repository
- A public repository for gel-based proteomics data linked to protein identification published in the literature.
World-2DPAGE Portal
- A dynamic portal to query simultaneously world-wide gel-based proteomics databases.
SWISS-2DPAGE
- The Geneva Two-dimensional polyacrylamide gel electrophoresis database.
ExPASy
- The resources web server of the
Swiss Institute of Bioinformatics
Database constructed and maintained by
Angel Garcia
, using the
Make2D-DB II
package (
ver. 3.10.2
) from the
World-2DPAGE Constellation
of the
ExPASy web server
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